species:   Bodot
pid:       PID1075
parent:    Bd-milR28
paralog:   
locus:     MU009149.1:2885287-2885353
matures:   ['UAUUUCGGCGUCACAACUCUUC', 'AGGCUUGUGAGGUCGACGG']
srr:       SRR8374848
genome:    /Users/jax/+Genomes/Fungal_genomes/Bodot.GCA_011064635.1_ASM1106463v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Hu2019-my.SRR8374848.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Hu2019-my.SRR8374848.cram MU009149.1:2885287-2885353

0 out of bounds
6 alignments
5 proper strand
5 stranded perfect matches

        ************************      *********************        
UCAUCUUGCCUAUUUCGGCGUCACAACUCUUCUACUCCGGAGGCUUGUGAGGUCGACGGCGCUCGCU
......((((....(((((.((((((.(((((......))))).)))))).))))).))))......
----------UAUUUCGGCGUCACAACUCUUC----------------------------------- l=22 a=4 c
----------------------------------------AGGCUUGUGAGGUCGACGG-------- l=19 a=0 c*
----------UAUUUCGGCGUCACAACUCUUC----------------------------------- l=22 a=4 ma
----------------------------------------AGGCUUGUGAGGUCGACGG-------- l=19 a=0 ma*

----------UAUUUCGGCGUCACAACUCUU------------------------------------ l=21 a=1 
----------UAUUUCGGCGUCACAACUCUUC----------------------------------- l=22 a=4 (c,ma)

mb-01011
ax-1011111
ku-01
ss-111111111110
fn-111
